Genomic and Evolutionary Analysis in COVID-19

Effectiveness of Self-Collected, Ambient Temperature–Preserved Nasal Swabs Compared to Samples Collected by Trained Staff for Genotyping of Respiratory Viruses by Shotgun RNA Sequencing: Comparative Study

Raymond Soto, Litty Paul, Christina A Porucznik, Heng Xie, Rita Czako Stinnett, Benjamin Briggs, Matthew Biggerstaff, Joseph Stanford, Robert Schlaberg

JMIR Form Res 2023 (Nov 24); 7:e32848

Download Citation: END BibTex RIS

Mutations of SARS-CoV-2 Structural Proteins in the Alpha, Beta, Gamma, and Delta Variants: Bioinformatics Analysis

Saima Rehman Khetran, Roma Mustafa

JMIR Bioinform Biotech 2023 (Jul 14); 4:e43906

Download Citation: END BibTex RIS

SARS-CoV-2 Omicron Variant Genomic Sequences and Their Epidemiological Correlates Regarding the End of the Pandemic: In Silico Analysis

Ashutosh Kumar, Adil Asghar, Himanshu N Singh, Muneeb A Faiq, Sujeet Kumar, Ravi K Narayan, Gopichand Kumar, Prakhar Dwivedi, Chetan Sahni, Rakesh K Jha, Maheswari Kulandhasamy, Pranav Prasoon, Kishore Sesham, Kamla Kant, Sada N Pandey

JMIR Bioinform Biotech 2023 (Jan 10); 4:e42700

Download Citation: END BibTex RIS

Mutational Patterns Observed in SARS-CoV-2 Genomes Sampled From Successive Epochs Delimited by Major Public Health Events in Ontario, Canada: Genomic Surveillance Study

David Chen, Gurjit S Randhawa, Maximillian PM Soltysiak, Camila PE de Souza, Lila Kari, Shiva M Singh, Kathleen A Hill

JMIR Bioinform Biotech 2022 (Dec 22); 3(1):e42243

Download Citation: END BibTex RIS

Development of a Multiepitope Vaccine Against SARS-CoV-2: Immunoinformatics Study

Fatemeh Ghafouri, Reza Ahangari Cohan, Hilda Samimi, Ali Hosseini Rad S M, Mahmood Naderi, Farshid Noorbakhsh, Vahid Haghpanah

JMIR Bioinform Biotech 2022 (Jul 19); 3(1):e36100

Download Citation: END BibTex RIS

In Silico Comparative Analysis of the Functional, Structural, and Evolutionary Properties of SARS-CoV-2 Variant Spike Proteins

Renukaradhya K Math, Nayana Mudennavar, Palaksha Kanive Javaregowda, Ambuja Savanur

JMIR Bioinform Biotech 2022 (May 30); 3(1):e37391

Download Citation: END BibTex RIS

Identification of Potential Vaccine Candidates Against SARS-CoV-2 to Fight COVID-19: Reverse Vaccinology Approach

Ekta Gupta, Rupesh Kumar Mishra, Ravi Ranjan Kumar Niraj

JMIR Bioinform Biotech 2022 (Apr 26); 3(1):e32401

Download Citation: END BibTex RIS

Isolating SARS-CoV-2 Strains From Countries in the Same Meridian: Genome Evolutionary Analysis

Emilio Mastriani, Alexey V Rakov, Shu-Lin Liu

JMIR Bioinform Biotech 2021 (Jan 22); 2(1):e25995

Download Citation: END BibTex RIS

The Novel Coronavirus Enigma: Phylogeny and Analyses of Coevolving Mutations Among the SARS-CoV-2 Viruses Circulating in India

Anindita Banerjee, Rakesh Sarkar, Suvrotoa Mitra, Mahadeb Lo, Shanta Dutta, Mamta Chawla-Sarkar

JMIR Bioinform Biotech 2020 (Sep 07); 1(1):e20735

Download Citation: END BibTex RIS

Structural Basis for Designing Multiepitope Vaccines Against COVID-19 Infection: In Silico Vaccine Design and Validation

Sukrit Srivastava, Sonia Verma, Mohit Kamthania, Rupinder Kaur, Ruchi Kiran Badyal, Ajay Kumar Saxena, Ho-Joon Shin, Michael Kolbe, Kailash C Pandey

JMIR Bioinform Biotech 2020 (Jun 19); 1(1):e19371

Download Citation: END BibTex RIS