AI applications in genomics and pathology informatics, including generative AI

Articles published in 2025 in this theme: 10 (scroll down to load remaining articles)

2025

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Association of the Transmembrane Protease Serine 6 rs855791 Variant and Nongenetic Factors With Iron Deficiency Among Female Medical Students in Yogyakarta: Protocol for a Case-Control Study

Fenty Fenty, Erna Kristin, Tri Ratnaningsih, Supanji Supanji, Jajah Fachiroh, Dwi Aris Agung Nugrahaningsih

JMIR Res Protoc 2025 (Oct 29); 14:e79555

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Conversational Artificial Intelligence for Integrating Social Determinants, Genomics, and Clinical Data in Precision Medicine: Development and Implementation Study of the AI-HOPE-PM System

Ei-Wen Yang, Brigette Waldrup, Enrique Velazquez-Villarreal

JMIR Bioinform Biotech 2025 (Oct 10); 6:e76553

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Systemic Anticancer Therapy Timelines Extraction From Electronic Medical Records Text: Algorithm Development and Validation

Jiarui Yao, Eli Goldner, Harry Hochheiser, Sean Finan, John Levander, David Harris, Piet C de Groen, Elizabeth Buchbinder, Danielle Bitterman, Jeremy L Warner, Guergana Savova

JMIR Bioinform Biotech 2025 (Sep 03); 6:e67801

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Consumer Data is Key to Artificial Intelligence Value: Welcome to the Health Care Future

James P Cummings

J Particip Med 2025 (Aug 01); 17:e68261

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Framework for Race-Specific Prostate Cancer Detection Using Machine Learning Through Gene Expression Data: Feature Selection Optimization Approach

David Agustriawan, Adithama Mulia, Marlinda Vasty Overbeek, Vincent Kurniawan, Jheno Syechlo, Moeljono Widjaja, Muhammad Imran Ahmad

JMIR Bioinform Biotech 2025 (Jul 31); 6:e72423

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Automating Colon Polyp Classification in Digital Pathology by Evaluation of a “Machine Learning as a Service” AI Model: Algorithm Development and Validation Study

David Beyer, Evan Delancey, Logan McLeod

JMIR Form Res 2025 (Jul 31); 9:e67457

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Using Natural Language Processing to Identify Symptomatic Adverse Events in Pediatric Oncology: Tutorial for Clinician Researchers

Clifton P Thornton, Maryam Daniali, Lei Wang, Spandana Makeneni, Allison Barz Leahy

JMIR Bioinform Biotech 2025 (Jul 24); 6:e70751

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Extracting Knowledge From Scientific Texts on Patient-Derived Cancer Models Using Large Language Models: Algorithm Development and Validation Study

Jiarui Yao, Zinaida Perova, Tushar Mandloi, Elizabeth Lewis, Helen Parkinson, Guergana Savova

JMIR Bioinform Biotech 2025 (Jun 30); 6:e70706

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Public Awareness of and Attitudes Toward the Use of AI in Pathology Research and Practice: Mixed Methods Study

Claire Lewis, Jenny Groarke, Lisa Graham-Wisener, Jacqueline James

J Med Internet Res 2025 (Apr 02); 27:e59591

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Evaluating and Enhancing Japanese Large Language Models for Genetic Counseling Support: Comparative Study of Domain Adaptation and the Development of an Expert-Evaluated Dataset

Takuya Fukushima, Masae Manabe, Shuntaro Yada, Shoko Wakamiya, Akiko Yoshida, Yusaku Urakawa, Akiko Maeda, Shigeyuki Kan, Masayo Takahashi, Eiji Aramaki

JMIR Med Inform 2025 (Jan 16); 13:e65047

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