2025

Vol. 6 (2025)

Previous volume Next volume

Back to all issues

Download Citations: END BibTex RIS | View PDF

Bioinformatics, genomics, tools and databases

View E-collection for ‘Bioinformatics, genomics, tools and databases’

View image

Investigating Associations Between Prognostic Factors in Gliomas: Unsupervised Multiple Correspondence Analysis

Maria Eduarda Goes Job, Heidge Fukumasu, Tathiane Maistro Malta, Pedro Luiz Porfirio Xavier

JMIR Bioinform Biotech 2025 (Mar 12); 6:e65645

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Decentralized Biobanking Apps for Patient Tracking of Biospecimen Research: Real-World Usability and Feasibility Study

William Sanchez, Ananya Dewan, Eve Budd, M Eifler, Robert C Miller, Jeffery Kahn, Mario Macis, Marielle Gross

JMIR Bioinform Biotech 2025 (Apr 10); 6:e70463

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Optimizing Feature Selection and Machine Learning Algorithms for Early Detection of Prediabetes Risk: Comparative Study

Mahmoud B Almadhoun, MA Burhanuddin

JMIR Bioinform Biotech 2025 (Jul 31); 6:e70621

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

In Silico Analysis and Validation of A Disintegrin and Metalloprotease (ADAM) 17 Gene Missense Variants: Structural Bioinformatics Study

Abdelilah Mechnine, Asmae Saih, Lahcen Wakrim, Ahmed Aarab

JMIR Bioinform Biotech 2025 (Aug 25); 6:e72133

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Immunogenicity of Adalimumab in Bacterial Molecular Mimicry: In Silico Analysis

Diana Isabel Pachón-Suárez, Germán Mejía-Salgado, Oscar Correa, Andrés Sánchez, Marlon Munera, Alejandra de-la-Torre

JMIR Bioinform Biotech 2025 (Dec 08); 6:e83872

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Theme Issue 2025: Artificial Intelligence in Oncology

View E-collection for ‘Theme Issue 2025: Artificial Intelligence in Oncology’

View image

A Hybrid Deep Learning–Based Feature Selection Approach for Supporting Early Detection of Long-Term Behavioral Outcomes in Survivors of Cancer: Cross-Sectional Study

Tracy Huang, Chun-Kit Ngan, Yin Ting Cheung, Madelyn Marcotte, Benjamin Cabrera

JMIR Bioinform Biotech 2025 (Mar 13); 6:e65001

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Extracting Knowledge From Scientific Texts on Patient-Derived Cancer Models Using Large Language Models: Algorithm Development and Validation Study

Jiarui Yao, Zinaida Perova, Tushar Mandloi, Elizabeth Lewis, Helen Parkinson, Guergana Savova

JMIR Bioinform Biotech 2025 (Jun 30); 6:e70706

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Using Natural Language Processing to Identify Symptomatic Adverse Events in Pediatric Oncology: Tutorial for Clinician Researchers

Clifton P Thornton, Maryam Daniali, Lei Wang, Spandana Makeneni, Allison Barz Leahy

JMIR Bioinform Biotech 2025 (Jul 24); 6:e70751

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Lung Cancer Diagnosis From Computed Tomography Images Using Deep Learning Algorithms With Random Pixel Swap Data Augmentation: Algorithm Development and Validation Study

Ayomide Adeyemi Abe, Mpumelelo Nyathi

JMIR Bioinform Biotech 2025 (Sep 03); 6:e68848

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Systemic Anticancer Therapy Timelines Extraction From Electronic Medical Records Text: Algorithm Development and Validation

Jiarui Yao, Eli Goldner, Harry Hochheiser, Sean Finan, John Levander, David Harris, Piet C de Groen, Elizabeth Buchbinder, Danielle Bitterman, Jeremy L Warner, Guergana Savova

JMIR Bioinform Biotech 2025 (Sep 03); 6:e67801

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Paired-Sample and Pathway-Anchored MLOps Framework for Robust Transcriptomic Machine Learning in Small Cohorts: Model Classification Study

Mahdieh Shabanian, Nima Pouladi, Liam Wilson, Mattia Prosperi, Yves A Lussier

JMIR Bioinform Biotech 2025 (Oct 08); 6:e80735

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Mathematical modeling in biology

View E-collection for ‘Mathematical modeling in biology’

View image

Designing a Finite Element Model to Determine the Different Fixation Positions of Tracheal Catheters in the Oral Cavity for Minimizing the Risk of Oral Mucosal Pressure Injury: Comparison Study

Zhiwei Wang, Zhenghui Dong, Xiaoyan He, ZhenZhen Tao, Jinfang QI, Yatian Zhang, Xian Ma

JMIR Bioinform Biotech 2025 (Jul 11); 6:e69298

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Viewpoint

View E-collection for ‘Viewpoint’

View image

Harnessing AI and Quantum Computing for Revolutionizing Drug Discovery and Approval Processes: Case Example for Collagen Toxicity

David Melvin Braga, Bharat Rawal

JMIR Bioinform Biotech 2025 (Jul 22); 6:e69800

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Cancer genomic data analysis

View E-collection for ‘Cancer genomic data analysis’

View image

Framework for Race-Specific Prostate Cancer Detection Using Machine Learning Through Gene Expression Data: Feature Selection Optimization Approach

David Agustriawan, Adithama Mulia, Marlinda Vasty Overbeek, Vincent Kurniawan, Jheno Syechlo, Moeljono Widjaja, Muhammad Imran Ahmad

JMIR Bioinform Biotech 2025 (Jul 31); 6:e72423

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

View image

Stacked Deep Learning Ensemble for Multiomics Cancer Type Classification: Development and Validation Study

Amani Ameen, Nofe Alganmi, Nada Bajnaid

JMIR Bioinform Biotech 2025 (Aug 12); 6:e70709

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Review

View E-collection for ‘Review’

View image

Genetic Diversity and Mutation Frequency Databases in Ethnic Populations: Systematic Review

Shumaila Khan, Mahmood Alam, Iqbal Qasim, Shahnaz Khan, Wahab Khan, Orken Mamyrbayev, Ainur Akhmediyarova, Nurzhan Mukazhanov, Zhibek Alibiyeva,

JMIR Bioinform Biotech 2025 (Aug 11); 6:e69454

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

AI applications in genomics and pathology informatics, including generative AI

View E-collection for ‘AI applications in genomics and pathology informatics, including generative AI’

View image

Conversational Artificial Intelligence for Integrating Social Determinants, Genomics, and Clinical Data in Precision Medicine: Development and Implementation Study of the AI-HOPE-PM System

Ei-Wen Yang, Brigette Waldrup, Enrique Velazquez-Villarreal

JMIR Bioinform Biotech 2025 (Oct 10); 6:e76553

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Immunoinformatics and Pathology informatics

View E-collection for ‘Immunoinformatics and Pathology informatics’

View image

Estimating Antigen Test Sensitivity via Target Distribution Balancing: Development and Validation Study

Miguel Bosch, Adriana Moreno, Raul Colmenares, Jose Arocha, Sina Hoche, Auris Garcia, Daniela Hall, Dawlyn Garcia, Lindsey Rudtner, Nol Salcedo, Irene Bosch

JMIR Bioinform Biotech 2025 (Oct 20); 6:e68476

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Network biology

View E-collection for ‘Network biology’

View image

Protein-Protein Interactions in Papillary and Nonpapillary Urothelial Carcinoma Architectures: Comparative Study

Charissa Chou, Yiğit Baykara, Sean Hacking, Ali Amin, Liang Cheng, Alper Uzun, Ece Dilber Gamsiz Uzun

JMIR Bioinform Biotech 2025 (Nov 27); 6:e76736

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML

Structural biology and molecular modeling

View E-collection for ‘Structural biology and molecular modeling’

View image

Structural and Functional Impacts of SARS-CoV-2 Spike Protein Mutations: Insights From Predictive Modeling and Analytics

Edem K Netsey, Samuel M Naandam, Joseph Asante Jnr, Kuukua E Abraham, Aayire C Yadem, Gabriel Owusu, Jeffrey G Shaffer, Sudesh K Srivastav, Seydou Doumbia, Ellis Owusu-Dabo, Chris E Morkle, Desmond Yemeh, Stephen Manortey, Ernest Yankson, Mamadou Sangare, Samuel Kakraba

JMIR Bioinform Biotech 2025 (Dec 08); 6:e73637

Download Citation: END BibTex RIS

Share on Bluesky Share on Twitter Share on Facebook Share on LinkedIn

Download PDF Download XML