2025

Investigating Associations Between Prognostic Factors in Gliomas: Unsupervised Multiple Correspondence Analysis

Maria Eduarda Goes Job, Heidge Fukumasu, Tathiane Maistro Malta, Pedro Luiz Porfirio Xavier

JMIR Bioinform Biotech 2025 (Mar 12); 6:e65645

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Decentralized Biobanking Apps for Patient Tracking of Biospecimen Research: Real-World Usability and Feasibility Study

William Sanchez, Ananya Dewan, Eve Budd, M Eifler, Robert C Miller, Jeffery Kahn, Mario Macis, Marielle Gross

JMIR Bioinform Biotech 2025 (Apr 10); 6:e70463

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Optimizing Feature Selection and Machine Learning Algorithms for Early Detection of Prediabetes Risk: Comparative Study

Mahmoud B Almadhoun, MA Burhanuddin

JMIR Bioinform Biotech 2025 (Jul 31); 6:e70621

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In Silico Analysis and Validation of A Disintegrin and Metalloprotease (ADAM) 17 Gene Missense Variants: Structural Bioinformatics Study

Abdelilah Mechnine, Asmae Saih, Lahcen Wakrim, Ahmed Aarab

JMIR Bioinform Biotech 2025 (Aug 25); 6:e72133

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Immunogenicity of Adalimumab in Bacterial Molecular Mimicry: In Silico Analysis

Diana Isabel Pachón-Suárez, Germán Mejía-Salgado, Oscar Correa, Andrés Sánchez, Marlon Munera, Alejandra de-la-Torre

JMIR Bioinform Biotech 2025 (Dec 08); 6:e83872

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A Hybrid Deep Learning–Based Feature Selection Approach for Supporting Early Detection of Long-Term Behavioral Outcomes in Survivors of Cancer: Cross-Sectional Study

Tracy Huang, Chun-Kit Ngan, Yin Ting Cheung, Madelyn Marcotte, Benjamin Cabrera

JMIR Bioinform Biotech 2025 (Mar 13); 6:e65001

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Extracting Knowledge From Scientific Texts on Patient-Derived Cancer Models Using Large Language Models: Algorithm Development and Validation Study

Jiarui Yao, Zinaida Perova, Tushar Mandloi, Elizabeth Lewis, Helen Parkinson, Guergana Savova

JMIR Bioinform Biotech 2025 (Jun 30); 6:e70706

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Using Natural Language Processing to Identify Symptomatic Adverse Events in Pediatric Oncology: Tutorial for Clinician Researchers

Clifton P Thornton, Maryam Daniali, Lei Wang, Spandana Makeneni, Allison Barz Leahy

JMIR Bioinform Biotech 2025 (Jul 24); 6:e70751

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Lung Cancer Diagnosis From Computed Tomography Images Using Deep Learning Algorithms With Random Pixel Swap Data Augmentation: Algorithm Development and Validation Study

Ayomide Adeyemi Abe, Mpumelelo Nyathi

JMIR Bioinform Biotech 2025 (Sep 03); 6:e68848

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Systemic Anticancer Therapy Timelines Extraction From Electronic Medical Records Text: Algorithm Development and Validation

Jiarui Yao, Eli Goldner, Harry Hochheiser, Sean Finan, John Levander, David Harris, Piet C de Groen, Elizabeth Buchbinder, Danielle Bitterman, Jeremy L Warner, Guergana Savova

JMIR Bioinform Biotech 2025 (Sep 03); 6:e67801

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Paired-Sample and Pathway-Anchored MLOps Framework for Robust Transcriptomic Machine Learning in Small Cohorts: Model Classification Study

Mahdieh Shabanian, Nima Pouladi, Liam Wilson, Mattia Prosperi, Yves A Lussier

JMIR Bioinform Biotech 2025 (Oct 08); 6:e80735

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Designing a Finite Element Model to Determine the Different Fixation Positions of Tracheal Catheters in the Oral Cavity for Minimizing the Risk of Oral Mucosal Pressure Injury: Comparison Study

Zhiwei Wang, Zhenghui Dong, Xiaoyan He, ZhenZhen Tao, Jinfang QI, Yatian Zhang, Xian Ma

JMIR Bioinform Biotech 2025 (Jul 11); 6:e69298

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Harnessing AI and Quantum Computing for Revolutionizing Drug Discovery and Approval Processes: Case Example for Collagen Toxicity

David Melvin Braga, Bharat Rawal

JMIR Bioinform Biotech 2025 (Jul 22); 6:e69800

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Framework for Race-Specific Prostate Cancer Detection Using Machine Learning Through Gene Expression Data: Feature Selection Optimization Approach

David Agustriawan, Adithama Mulia, Marlinda Vasty Overbeek, Vincent Kurniawan, Jheno Syechlo, Moeljono Widjaja, Muhammad Imran Ahmad

JMIR Bioinform Biotech 2025 (Jul 31); 6:e72423

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Stacked Deep Learning Ensemble for Multiomics Cancer Type Classification: Development and Validation Study

Amani Ameen, Nofe Alganmi, Nada Bajnaid

JMIR Bioinform Biotech 2025 (Aug 12); 6:e70709

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Genetic Diversity and Mutation Frequency Databases in Ethnic Populations: Systematic Review

Shumaila Khan, Mahmood Alam, Iqbal Qasim, Shahnaz Khan, Wahab Khan, Orken Mamyrbayev, Ainur Akhmediyarova, Nurzhan Mukazhanov, Zhibek Alibiyeva,

JMIR Bioinform Biotech 2025 (Aug 11); 6:e69454

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Conversational Artificial Intelligence for Integrating Social Determinants, Genomics, and Clinical Data in Precision Medicine: Development and Implementation Study of the AI-HOPE-PM System

Ei-Wen Yang, Brigette Waldrup, Enrique Velazquez-Villarreal

JMIR Bioinform Biotech 2025 (Oct 10); 6:e76553

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Estimating Antigen Test Sensitivity via Target Distribution Balancing: Development and Validation Study

Miguel Bosch, Adriana Moreno, Raul Colmenares, Jose Arocha, Sina Hoche, Auris Garcia, Daniela Hall, Dawlyn Garcia, Lindsey Rudtner, Nol Salcedo, Irene Bosch

JMIR Bioinform Biotech 2025 (Oct 20); 6:e68476

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Protein-Protein Interactions in Papillary and Nonpapillary Urothelial Carcinoma Architectures: Comparative Study

Charissa Chou, Yiğit Baykara, Sean Hacking, Ali Amin, Liang Cheng, Alper Uzun, Ece Dilber Gamsiz Uzun

JMIR Bioinform Biotech 2025 (Nov 27); 6:e76736

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Structural and Functional Impacts of SARS-CoV-2 Spike Protein Mutations: Insights From Predictive Modeling and Analytics

Edem K Netsey, Samuel M Naandam, Joseph Asante Jnr, Kuukua E Abraham, Aayire C Yadem, Gabriel Owusu, Jeffrey G Shaffer, Sudesh K Srivastav, Seydou Doumbia, Ellis Owusu-Dabo, Chris E Morkle, Desmond Yemeh, Stephen Manortey, Ernest Yankson, Mamadou Sangare, Samuel Kakraba

JMIR Bioinform Biotech 2025 (Dec 08); 6:e73637

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